Cluster list

From Molecular Modeling Wiki

Revision as of 15:45, 13 March 2009 (view source) Polach (Talk | contribs) ← Older edit		Revision as of 15:47, 13 March 2009 (view source) Polach (Talk | contribs) Newer edit →
Line 111:		Line 111:
	Total nodes: 40		Total nodes: 40
-
	Total cores: 40		Total cores: 40
-
	Queuing system: DQS		Queuing system: DQS
-
	Usage:		Usage:
Line 135:		Line 132:
	|800 MB		|800 MB
	|120 GB		|120 GB
		+	|}
		+
		+	===argon===
		+
		+	Total nodes:
		+	Total cores:
		+	Queuing system: SGE
		+	Usage:
		+
		+	{| border="1"  cellpadding="10" cellspacing="0"
		+	|-
		+	!Nodes
		+	!# of nodes
		+	!Queue
		+	!CPU
		+	!Cores/node
		+	!Available RAM/core
		+	!Scratch/node
		+	|-
		+	|
		+	|
		+	|
		+	|
		+	|
		+	|
		+	|
	|}		|}

---

Revision as of 15:47, 13 March 2009

Contents 1 Overview 1.1 General description 1.2 Cluster survey 2 Clusters 2.1 cobalt 2.2 argon

Overview

General description

Depending on the hardware equipment and the age of a cluster there is always a set of typical applications that fit the cluster capabilities. The idea is to run any calculation on a cluster that just fits the job requirements; running it on less capable cluster would slow down the calculation or prevent running it at all, starting a low-demanding job on highly equippped cluster would waste the resources and prevent running jobs that require such equipment.

Cluster survey

Name	Year of construction	Memory size [GB] / core	Disk (scratch) size [GB]	Usage	Access
cobalt	(?) 2003	1	120	simple calculations, student tests, teaching	public
argon	2005	2	160	single-processor calculations with lower requirements	public
krypton	2005	1 - 2	160	single-processor calculations with lower requirements	public
radon	2005	2 - 4	320	single-processor calculations with average requirements	public
palladium	2004 - 2005	3 - 6	240 - 600	older cluster for memory and/or disk space demanding calculations	public
iridium	2006 - 2008	2	320 - 1000	general use	restricted
helium	2006 - 2008	2	250 - 320	parallel molecular dynamics calculations	restricted
francium	2007	4	640	parallel molecular dynamics calculations with infiniband	restricted
lithium	2006 - 2008	4 - 16	1600 - 6000	highly demanding parallel and/or single-processor calculations with large memory and disk space requirements	restricted
uranium	2008	2	1500	general use	public
barium	2007 - 2008	1 - 2	320 - 1500	mostly parallel molecular dynamics calculations	restricted
thallium	2007 - 2008	1 - 2	1500	general use	restricted

Clusters

cobalt

Total nodes: 40 Total cores: 40 Queuing system: DQS Usage:

Nodes	# of nodes	Queue	CPU	Cores/node	Available RAM/core	Scratch/node
c01 - c40	40	c01_a - c40_a	Intel Pentium 4 2.80GHz	1	800 MB	120 GB

argon

Total nodes: Total cores: Queuing system: SGE Usage:

Nodes	# of nodes	Queue	CPU	Cores/node	Available RAM/core	Scratch/node