Cluster list
From Molecular Modeling Wiki
Cluster list
General description
Depending on the hardware equipment and the age of a cluster there is always a set of typical applications that fit the cluster capabilities. The idea is to run any calculation on a cluster that just fits the job requirements; running it on less capable cluster would slow down the calculation or prevent running it at all, starting a low-demanding job on highly equippped cluster would waste the resources and prevent running jobs that require such equipment.
Name | Age | Memory size / core | Disk (scratch space) size | Usage | Access |
---|
- cobalt
- very old cluster; good for tests, student experiments, teaching (public access)
- argon
- krypton
- radon
- older clusters but still in a good condition; used for sinle-processor calculations that do not require much resources (public access)
- palladium
- older cluster for memory and/or disk space demanding calculations (public access)
- iridium
- general use cluster (limited access)
- helium
- parallel molecular dynamics calculations (limited access)
- francium
- parallel molecular dynamics calculations with infiniband (limited access)
- lithium
- cluster for higly demanding parallel and/or single-processor calculations with a lot memory and disk space (limited access)
- uranium
- general use cluster (public access)
- barium
- cluster for parallel molecular dynamics calculations (limited access)
- thallium
- general use cluster (very limited access)
Clusters available | |||||||||||
Name | Maxjob | Queues | Memory and scratch | Nodes | Hardware info | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
cobalt | 4 | c.._a (40x) | 896 MB/120 GB | c01-c40 | Intel Pentium 4 (2800 MHz)/1 GB | ||||||
argon | 3 | aq (44x) | 1792 MB/143 GB | Intel Pentium 4 (3.40 GHz) /2 GB | |||||||
krypton | 4 | kq1 (20x) | 768 MB/143 GB | k17-k36 | Intel Pentium 4 (3.40 GHz) /1GB | ||||||
kq2 (16x) | 1792 MB/143 GB | k01-k16 | Intel Pentium 4 (3.40 GHz) /2 GB | ||||||||
kx (8x) | k37-k44 | Intel Pentium 4 (3.40 GHz) /1 GB | |||||||||
radon | 4 | rq2 (22x) | 1792 MB/285 GB | r25-r46 | AMD Athlon64 3500+ /2 GB | ||||||
rq4 (24x) | 3840 MB/285 GB | r01-r24 | AMD Athlon64 3500+ /4 GB | ||||||||
palladium | 3 | pqos (8x) | 2560 MB/110 GB | p01-p04 | Opteron 244 (1800 MHz) /6 GB | ||||||
pqop (10x dual) | 5120 MB/220 GB | p05-p14 | Opteron 244 (1800 MHz) /6 GB | ||||||||
pqns (8x) | 5632 MB/290 GB | p15-p18 | Opteron 250 (2400 MHz) /12 GB | ||||||||
pqnp (6x dual) | 11264 MB/580 GB | p19-p24 | Opteron 250 (2400 MHz) /12 GB | ||||||||
iridium | |||||||||||
francium | |||||||||||
lithium | |||||||||||
helium | (24x dual) | DualCore AMD Opteron 275 (2200 MHz) | |||||||||
cerny |